4Z5T
The nucleosome containing human H3.5
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL41XU |
| Synchrotron site | SPring-8 |
| Beamline | BL41XU |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-07-14 |
| Detector | RAYONIX MX225HE |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 104.891, 109.129, 174.492 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 37.812 - 2.800 |
| R-factor | 0.2298 |
| Rwork | 0.228 |
| R-free | 0.26940 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3av2 |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.815 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.900 |
| High resolution limit [Å] | 2.800 | 6.030 | 2.800 |
| Rmerge | 0.094 | 0.054 | 0.500 |
| Rmeas | 0.100 | 0.057 | 0.543 |
| Rpim | 0.032 | 0.018 | 0.207 |
| Total number of observations | 447587 | ||
| Number of reflections | 50581 | ||
| <I/σ(I)> | 10.2 | ||
| Completeness [%] | 99.5 | 98.8 | 96.5 |
| Redundancy | 8.8 | 10.2 | 6.4 |
| CC(1/2) | 0.998 | 0.722 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | potassium cacodylate, potassium chloride, manganese chloride |






