4Z0D
Crystal structure of FVO strain Plasmodium falciparum AMA1 in complex with the RON2hp [Phe2038Trp] peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-11-07 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 0.9464 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.952, 72.011, 115.589 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.058 - 2.100 |
R-factor | 0.2044 |
Rwork | 0.203 |
R-free | 0.24160 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.599 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.530 | 38.530 | 2.160 |
High resolution limit [Å] | 2.100 | 8.910 | 2.100 |
Rmerge | 0.313 | 0.077 | 1.504 |
Rpim | 0.128 | 0.034 | 0.617 |
Total number of observations | 133011 | 1762 | 10231 |
Number of reflections | 19242 | ||
<I/σ(I)> | 5.4 | 12.7 | 1.6 |
Completeness [%] | 100.0 | 99.4 | 100 |
Redundancy | 6.9 | 5.6 | 6.8 |
CC(1/2) | 0.981 | 0.995 | 0.686 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.6 | 298 | 15-20% PEG400, 0.1 M Tris-HCl, pH 8.6, 0.1 M sodium acetate and 20% isopropanol |