4YW4
Streptococcus pneumoniae sialidase NanC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-07-18 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.87290 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 99.697, 74.770, 113.110 |
Unit cell angles | 90.00, 95.71, 90.00 |
Refinement procedure
Resolution | 59.709 - 2.200 |
R-factor | 0.1834 |
Rwork | 0.182 |
R-free | 0.21420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vw0 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.526 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.709 | 59.709 | 2.260 |
High resolution limit [Å] | 2.200 | 9.840 | 2.200 |
Rmerge | 0.042 | 0.350 | |
Rmeas | 0.110 | ||
Rpim | 0.064 | 0.031 | 0.258 |
Total number of observations | 224169 | 2485 | 16483 |
Number of reflections | 83261 | ||
<I/σ(I)> | 7.6 | 15.6 | 2.8 |
Completeness [%] | 98.9 | 96.5 | 99.4 |
Redundancy | 2.7 | 2.6 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 16% PEG8000, 20% glycerol, 40mM monopotassium phosphate |