4YTQ
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 1-deoxy D-tagatose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-10-22 |
Detector | RIGAKU RAXIS VII |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.327, 126.308, 99.498 |
Unit cell angles | 90.00, 101.77, 90.00 |
Refinement procedure
Resolution | 19.320 - 1.900 |
R-factor | 0.177 |
Rwork | 0.174 |
R-free | 0.21300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qul |
RMSD bond length | 0.005 |
RMSD bond angle | 1.200 |
Data reduction software | d*TREK (8.0SSI) |
Data scaling software | CrystalClear |
Phasing software | MOLREP |
Refinement software | CNS (1.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.320 | 19.320 | 1.970 |
High resolution limit [Å] | 1.900 | 4.080 | 1.900 |
Rmerge | 0.077 | 0.040 | 0.276 |
Total number of observations | 289797 | 29544 | 28378 |
Number of reflections | 98941 | ||
<I/σ(I)> | 9.1 | 20.4 | 3.8 |
Completeness [%] | 99.6 | 98.3 | 99.8 |
Redundancy | 2.91 | 2.93 | 2.87 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 0.1 M Sodium acetate, 6 -9 % PEG 4000 |