4YRC
Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 2-aminoquinolin-8-ol (Chem 89)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-05 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 65.244, 119.366, 65.660 |
Unit cell angles | 90.00, 93.61, 90.00 |
Refinement procedure
Resolution | 37.270 - 2.100 |
R-factor | 0.1858 |
Rwork | 0.184 |
R-free | 0.21910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lc0 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.152 |
Data reduction software | DENZO |
Data scaling software | Aimless (0.1.27) |
Phasing software | REFMAC |
Refinement software | REFMAC (refmac_5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.270 | 37.270 | 2.160 |
High resolution limit [Å] | 2.100 | 8.910 | 2.100 |
Rmerge | 0.062 | 0.026 | 0.544 |
Rpim | 0.048 | 0.021 | 0.430 |
Total number of observations | 68265 | 945 | 3335 |
Number of reflections | 27892 | ||
<I/σ(I)> | 9.8 | 31.2 | 1.7 |
Completeness [%] | 95.5 | 97.5 | 69.5 |
Redundancy | 2.4 | 2.4 | 2 |
CC(1/2) | 0.997 | 0.997 | 0.722 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2 M ammonium sulfate, 23 % to 28 % PEG 3350, 0.1 M sodium citrate pH 4.8 to 5.3, 1 mM TCEP |