4YR9
mouse TDH with NAD+ bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-07-05 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97915 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 74.150, 160.130, 194.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.420 - 2.800 |
R-factor | 0.218 |
Rwork | 0.216 |
R-free | 0.26440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yy7 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.971 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 123.572 | 38.860 | 2.950 |
High resolution limit [Å] | 2.800 | 8.850 | 2.800 |
Rmerge | 0.045 | 0.587 | |
Rmeas | 0.115 | ||
Rpim | 0.052 | 0.019 | 0.306 |
Total number of observations | 226819 | 12701 | 29248 |
Number of reflections | 53532 | ||
<I/σ(I)> | 11 | 33 | 2.2 |
Completeness [%] | 92.7 | 98.5 | 88.1 |
Redundancy | 4.2 | 6.4 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 283 | 0.2 M Sodium chloride, 0.1 M HEPES, 25% w/v Polyethylene glycol 3350 |