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4YO8

Crystal structure of Helicobacter pylori 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with (((4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl)(hexyl)amino)methanol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2014-08-28
DetectorADSC QUANTUM 315r
Wavelength(s)1.075
Spacegroup nameP 1 21 1
Unit cell lengths65.091, 69.446, 65.566
Unit cell angles90.00, 113.08, 90.00
Refinement procedure
Resolution25.000 - 2.100
R-factor0.1891
Rwork0.187
R-free0.22410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ffs
RMSD bond length0.010
RMSD bond angle1.413
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.5.6)
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.140
High resolution limit [Å]2.1005.7002.100
Rmerge0.0730.0230.588
Total number of observations115268
Number of reflections31369
<I/σ(I)>10.92.32
Completeness [%]99.898.199.3
Redundancy3.73.73.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP295Protein (10 mg/mL); Reservoir (0.2 M sodium malonate pH 7.0 and 20 % (w/v) PEG 3350); Cryoprotection (20% (v/v) glycerol)

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