4YJ2
Crystal structure of tubulin bound to MI-181
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-16 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 104.830, 157.650, 181.030 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 90.718 - 2.600 |
R-factor | 0.1925 |
Rwork | 0.188 |
R-free | 0.23110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o2b |
RMSD bond length | 0.003 |
RMSD bond angle | 0.551 |
Data reduction software | XDS (January 10, 2014) |
Data scaling software | XSCALE (January 10, 2014) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 90.720 | 11.630 | 2.670 |
High resolution limit [Å] | 2.600 | 8.220 | 2.600 |
Rmerge | 0.076 | 0.024 | 1.108 |
Rmeas | 0.082 | 0.026 | 1.205 |
Number of reflections | 92610 | 2001 | 6771 |
<I/σ(I)> | 17.79 | 63.61 | 1.64 |
Completeness [%] | 99.8 | 100 | 99.1 |
Redundancy | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.7 | 298 | 100 mM MES/imidazole, 30 mM CaCl2, 30 mM MgCl2, 6% (w/v) PEG 4000, 7% glycerol CRYO Paratone-N oil |