4YII
Structure of an APC2-UBCH10 complex reveals distinctive cullin-RING ligase mechanism for Anaphase-promoting complex/Cyclosome
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.2826 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 133.113, 33.188, 51.963 |
Unit cell angles | 90.00, 100.12, 90.00 |
Refinement procedure
Resolution | 44.272 - 1.804 |
R-factor | 0.1985 |
Rwork | 0.196 |
R-free | 0.24540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ldd 1i7k |
RMSD bond length | 0.013 |
RMSD bond angle | 1.499 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.1_743)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.050 | 0.347 |
Number of reflections | 21055 | |
<I/σ(I)> | 28.4 | |
Completeness [%] | 94.0 | 68.2 |
Redundancy | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 296 | PEG 3000, MES |