4YGD
Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-bound form 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2011-07-24 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.90000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 103.063, 58.765, 119.386 |
Unit cell angles | 90.00, 109.01, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.510 |
R-factor | 0.195 |
Rwork | 0.193 |
R-free | 0.23200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3a4u |
RMSD bond length | 0.013 |
RMSD bond angle | 1.533 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.050 | 0.178 |
Number of reflections | 46251 | |
<I/σ(I)> | 34.9 | 8.8 |
Completeness [%] | 99.4 | 97.8 |
Redundancy | 3.6 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 19% PEG3350, 8% ethylene glycol, 0.1 M Bis-Tris |