4YFU
Crystal structure of open Bacillus fragment DNA polymerase bound to DNA and dTTP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2007-06-23 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1.00 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 93.230, 108.100, 151.340 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 44.680 - 1.500 |
| R-factor | 0.1966 |
| Rwork | 0.195 |
| R-free | 0.23030 |
| RMSD bond length | 0.024 |
| RMSD bond angle | 2.529 |
| Data reduction software | DENZO |
| Data scaling software | XSCALE |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 44.700 | 1.590 | |
| High resolution limit [Å] | 1.500 | 4.470 | 1.500 |
| Rmerge | 0.063 | 0.050 | 0.498 |
| Rmeas | 0.071 | 0.058 | 0.584 |
| Total number of observations | 1111808 | ||
| Number of reflections | 241163 | 9170 | 37259 |
| <I/σ(I)> | 13.33 | 26.56 | 2.79 |
| Completeness [%] | 99.0 | 94.4 | 96.2 |
| Redundancy | 4.61 | 3.38 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 290 | ~50% ammonium sulfate, MES pH 5.8, magnesium sulfate, methyl pentanediol |
