4YE1
A cytochrome c plus calixarene structure - alternative ligand binding mode
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-01-01 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.872600 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 35.850, 56.070, 108.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.380 - 1.390 |
R-factor | 0.1318 |
Rwork | 0.130 |
R-free | 0.15970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tyi |
RMSD bond length | 0.009 |
RMSD bond angle | 1.319 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER (2.3.0) |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 108.000 | 26.354 | 1.470 |
High resolution limit [Å] | 1.392 | 4.400 | 1.390 |
Rmerge | 0.038 | 0.418 | |
Rmeas | 0.095 | ||
Rpim | 0.035 | 0.016 | 0.168 |
Total number of observations | 321450 | 10363 | 45511 |
Number of reflections | 44554 | ||
<I/σ(I)> | 14.6 | 30.3 | 4.6 |
Completeness [%] | 100.0 | 99.5 | 100 |
Redundancy | 7.2 | 6.6 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293.15 | 18 % PEG 8000, 50 mM NaCl, 100 mM MgCl2, 50 mM sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K |