4Y92
Crystal structure of the intertwined form of the Src tyrosine kinase SH3 domain E97T-Q128R mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-01-30 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 46.290, 46.290, 126.550 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.797 - 2.100 |
R-factor | 0.2116 |
Rwork | 0.210 |
R-free | 0.23320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jz3 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.299 |
Data reduction software | iMOSFLM (0.5.1) |
Data scaling software | Aimless (0.5.1) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.800 | 19.800 | 2.160 |
High resolution limit [Å] | 2.100 | 8.910 | 2.100 |
Rmerge | 0.073 | 0.021 | 0.749 |
Rpim | 0.021 | 0.007 | 0.204 |
Total number of observations | 67026 | 802 | 5331 |
Number of reflections | 4990 | ||
<I/σ(I)> | 24.3 | 58.9 | 3.9 |
Completeness [%] | 97.6 | 89.6 | 96.6 |
Redundancy | 13.4 | 9.7 | 14.1 |
CC(1/2) | 0.999 | 1.000 | 0.889 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 298 | 0.1M sodium acetate, 2.2 M ammonium sulphate, 10 %PEG 300, 10% Glycerol |