4Y83
Crystal structure of COT kinase domain in complex with 5-(2-amino-5-(quinolin-3-yl)pyridin-3-yl)-1,3,4-oxadiazole-2(3H)-thione
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-12-07 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | P 31 |
Unit cell lengths | 101.952, 101.952, 108.315 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 88.290 - 2.890 |
R-factor | 0.2037 |
Rwork | 0.202 |
R-free | 0.23950 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.040 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER-TNT (BUSTER 2.11.5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 88.310 | 88.310 | 2.970 |
High resolution limit [Å] | 2.890 | 15.380 | 2.890 |
Rmerge | 0.088 | 0.034 | 0.448 |
Rmeas | 0.097 | 0.038 | 0.492 |
Total number of observations | 162522 | ||
Number of reflections | 28213 | 184 | 2217 |
<I/σ(I)> | 14.72 | 30.78 | 3.67 |
Completeness [%] | 100.0 | 97.9 | 100 |
Redundancy | 5.76 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 298 | Reservoir solution: 8% (w/v) PEG4000, 12% (v/v) ethylene glycol, 7% (v/v) iso-propanol |