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4Y4V

Structure of Helicobacter pylori Csd6 in the D-Ala-bound state

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]100
Detector technologyCCD
Collection date2014-09-25
DetectorADSC QUANTUM 315r
Wavelength(s)0.9796
Spacegroup nameP 21 21 21
Unit cell lengths63.404, 90.607, 127.920
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 2.040
R-factor0.19381
Rwork0.191
R-free0.24197
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.393
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.080
High resolution limit [Å]2.0402.040
Rmerge0.0860.537
Number of reflections47575
<I/σ(I)>29.33.4
Completeness [%]99.9100
Redundancy4.784.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52961.5%(v/v) Tacsimate, 22%(w/v) PEG 3350, 100 mM sodium-HEPES

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