4XF5
Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0678), Target EFI-501078, with bound (S)-(+)-2-Amino-1-propanol.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-12 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 122.605, 51.154, 111.943 |
Unit cell angles | 90.00, 115.96, 90.00 |
Refinement procedure
Resolution | 27.559 - 1.450 |
R-factor | 0.1653 |
Rwork | 0.164 |
R-free | 0.19100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4uab |
RMSD bond length | 0.010 |
RMSD bond angle | 1.257 |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.650 | 100.650 | 1.470 |
High resolution limit [Å] | 1.450 | 7.940 | 1.450 |
Rmerge | 0.050 | 0.024 | 0.557 |
Rpim | 0.032 | 0.015 | 0.464 |
Total number of observations | 292987 | 2308 | 5649 |
Number of reflections | 99699 | ||
<I/σ(I)> | 12 | 32.1 | 1.5 |
Completeness [%] | 90.0 | 94.7 | 53.1 |
Redundancy | 2.9 | 3.3 | 2 |
CC(1/2) | 0.998 | 0.998 | 0.641 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | Protein (60.0 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM S-Alaninol); Reservoir (MCSG1(C6), 0.2 M Magnesium Chloride, 0.1 M HEPES pH 7.5, 30 %(v/v) PPG P 400); Cryoprotection (Reservoir Solution) |