4X6Y
Human soluble epoxide hydrolase in complex with a cyclopropyl urea derivative
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-10-14 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.00 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 129.228, 80.722, 87.326 |
Unit cell angles | 90.00, 126.22, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.100 |
R-factor | 0.2 |
Rwork | 0.198 |
R-free | 0.24420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ans |
RMSD bond length | 0.007 |
RMSD bond angle | 1.256 |
Data scaling software | HKL-2000 |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.140 |
High resolution limit [Å] | 2.100 | 5.700 | 2.100 |
Rmerge | 0.041 | 0.024 | 0.190 |
Rmeas | 0.058 | 0.034 | 0.268 |
Rpim | 0.041 | 0.024 | 0.189 |
Total number of observations | 106198 | ||
Number of reflections | 43406 | ||
<I/σ(I)> | 12.5 | ||
Completeness [%] | 78.4 | 92.6 | 55.6 |
Redundancy | 1.6 | 1.9 | 1.3 |
CC(1/2) | 0.996 | 0.819 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 277 | 20%(w/v) PEG8000, 200mM sodium iodide |