4WNJ
Crystal structure of Transthyretin-quercetin complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-03-23 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 42.858, 85.782, 63.871 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.891 - 1.398 |
R-factor | 0.1575 |
Rwork | 0.156 |
R-free | 0.19290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1f41 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.444 |
Data reduction software | XDS |
Data scaling software | SCALA |
Refinement software | PHENIX ((phenix.refine: dev_1647)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.891 | 1.470 |
High resolution limit [Å] | 1.398 | 1.398 |
Rmerge | 0.032 | 0.481 |
Number of reflections | 47208 | |
<I/σ(I)> | 27.3 | 3.4 |
Completeness [%] | 99.6 | 98.5 |
Redundancy | 6.3 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | Protein (5 mg/ml) in 20 mM sodium phosphate at pH 7. The reservoir solution was 2.0 M ammonium sulfate, 0.1 M KCl, 0.05 M sodium phosphate, pH 7.0 |