4WNC
Crystal structure of human wild-type GAPDH at 1.99 angstroms resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 12.3.1 |
Synchrotron site | ALS |
Beamline | 12.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-10-05 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.116 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 132.537, 81.423, 147.802 |
Unit cell angles | 90.00, 90.06, 90.00 |
Refinement procedure
Resolution | 49.361 - 1.990 |
R-factor | 0.139 |
Rwork | 0.139 |
R-free | 0.17900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1u8f |
RMSD bond length | 0.009 |
RMSD bond angle | 1.182 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.020 |
High resolution limit [Å] | 1.990 | 5.400 | 1.990 |
Rmerge | 0.092 | 0.040 | 0.336 |
Total number of observations | 795088 | ||
Number of reflections | 216430 | ||
<I/σ(I)> | 19.1 | ||
Completeness [%] | 99.9 | 99.4 | 99.9 |
Redundancy | 3.7 | 3.7 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 298 | 20% (w/v) PEG6000, 0.1 M sodium acetate, 0.01 M ZnCl2 |