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4WHP

Resting Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 6.5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-07-11
DetectorADSC QUANTUM 315r
Wavelength(s)0.97918
Spacegroup nameI 2 2 2
Unit cell lengths127.919, 140.767, 168.191
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.020 - 1.541
R-factor0.1416
Rwork0.140
R-free0.17190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3t63
RMSD bond length0.007
RMSD bond angle1.332
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.570
High resolution limit [Å]1.5404.1801.540
Rmerge0.1240.0510.475
Rmeas0.1390.0570.552
Rpim0.0610.0250.277
Total number of observations1026896
Number of reflections206314
<I/σ(I)>12.1
Completeness [%]93.457.1100
Redundancy54.63.7
CC(1/2)0.9950.832
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52951.2 M Ammonium Sulfate, 2.5 mM 2-mercaptoethanol, 100 mM MES pH 6.5; 2:1 ratio of well sol. to 40 mg/ml protein solution in drop

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