4WCI
Crystal structure of the 1st SH3 domain from human CD2AP (CMS) in complex with a proline-rich peptide (aa 378-393) from human RIN3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-12-20 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9173 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 95.526, 55.362, 64.557 |
Unit cell angles | 90.00, 131.72, 90.00 |
Refinement procedure
Resolution | 48.186 - 1.650 |
R-factor | 0.1938 |
Rwork | 0.192 |
R-free | 0.21880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j6f |
RMSD bond length | 0.007 |
RMSD bond angle | 1.010 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.190 | 1.740 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.132 | 0.479 |
Number of reflections | 29622 | |
<I/σ(I)> | 6.6 | 2.4 |
Completeness [%] | 97.7 | 93 |
Redundancy | 3.5 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Ca(ac) pH 4.2, 0.2 M Li2SO4 and 25% PEG 10 000 |