4W50
Structure of the EphA4 LBD in complex with peptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E SUPERBRIGHT |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2012-03-26 |
| Detector | RIGAKU RAXIS HTC |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 36.270, 127.690, 84.569 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 50.950 - 2.420 |
| R-factor | 0.1735 |
| Rwork | 0.171 |
| R-free | 0.23250 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2wo1 |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.468 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless (0.2.1) |
| Phasing software | PHASER (2.5.4) |
| Refinement software | REFMAC (5.8.0071) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.950 | 50.950 | 2.520 |
| High resolution limit [Å] | 2.420 | 8.720 | 2.420 |
| Rmerge | 0.083 | 0.066 | 0.246 |
| Rpim | 0.034 | 0.027 | 0.104 |
| Total number of observations | 179142 | 4627 | 18172 |
| Number of reflections | 27280 | ||
| <I/σ(I)> | 14.4 | 23.8 | 4.9 |
| Completeness [%] | 93.4 | 99.6 | 90.1 |
| Redundancy | 6.6 | 7.1 | 6.3 |
| CC(1/2) | 0.995 | 0.989 | 0.971 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 0.2M MgCl2, 0.1M Tris pH8.5, 25% PEG3350, 4% 1,3-butanediol |






