4W1X
Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with 1-(4-(4-(3-chlorobenzoyl)piperazin-1-yl)phenyl)ethanone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 193 |
Detector technology | CCD |
Collection date | 2013-09-14 |
Detector | NOIR-1 |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.000, 66.000, 204.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.330 - 1.800 |
R-factor | 0.1989 |
Rwork | 0.198 |
R-free | 0.22680 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.190 |
Data reduction software | d*TREK (9.9.9.6L) |
Data scaling software | d*TREK |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.330 | 47.330 | 1.860 |
High resolution limit [Å] | 1.800 | 3.880 | 1.800 |
Rmerge | 0.098 | 0.050 | 0.646 |
Total number of observations | 478465 | 59815 | 18396 |
Number of reflections | 77334 | ||
<I/σ(I)> | 9.2 | 22.1 | 1.6 |
Completeness [%] | 96.8 | 99.9 | 79 |
Redundancy | 6.06 | 7.01 | 2.89 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | Protein: 25 mM HEPES, 50 mM NaCl, 0.1 mM TCEP Reservoir:10% PEG 8000, 0.1M magnesium chloride, 0.1M HEPES, Cryo: 15% PEG 400 in reservoir solution |