4V7U
Crystal structure of the E. coli ribosome bound to erythromycin.
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.1155 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 211.961, 434.529, 623.580 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 82.400 - 3.100 |
R-factor | 0.2056 |
Rwork | 0.205 |
R-free | 0.25350 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3I1M 3I1N 3I1O 3I1P |
RMSD bond length | 0.006 |
RMSD bond angle | 1.471 |
Data scaling software | SCALEPACK |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 82.400 | 82.400 | 3.150 |
High resolution limit [Å] | 3.100 | 8.410 | 3.100 |
Rmerge | 0.101 | 0.040 | 0.753 |
Number of reflections | 925719 | ||
<I/σ(I)> | 10.4 | ||
Completeness [%] | 83.8 | 98.1 | 78.2 |
Redundancy | 3.3 | 5.4 | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.5 | 291 | 4.3% PEG 8000, 4.9% MPD, 3.8 mM MgCl2, 380 mM NH4Cl, 5.5 mM putrescine, 5 mM spermidine, 10 mM Tris, 20 mM MES pH 6.5. 0.25 mM EDTA, microbatch, temperature 291K |