4TXH
Crystal structure of uridine phosphorylase from Schistosoma mansoni in APO form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-25 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9611 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 96.070, 109.030, 119.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 80.402 - 1.892 |
R-factor | 0.2158 |
Rwork | 0.215 |
R-free | 0.23860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4txj |
RMSD bond length | 0.004 |
RMSD bond angle | 0.826 |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 96.070 | 96.070 | 1.940 |
High resolution limit [Å] | 1.890 | 8.460 | 1.890 |
Rmerge | 0.077 | 0.057 | 0.546 |
Number of reflections | 100065 | ||
<I/σ(I)> | 10 | 2.3 | |
Completeness [%] | 99.9 | 98.3 | 100 |
Redundancy | 4.4 | 4 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 100mM Bis-Tris pH 5.5. 20-25% PEG3350 |