4TQH
Human transthyretin (TTR) complexed with 3-(9H-fluoren-9-ylideneaminooxy)ethanoic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-01-30 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.87006 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 42.440, 85.960, 63.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.055 - 1.511 |
R-factor | 0.1872 |
Rwork | 0.185 |
R-free | 0.22200 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4tq8 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.639 |
Data scaling software | XDS |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.000 | 1.600 |
High resolution limit [Å] | 1.510 | 1.510 |
Rmerge | 0.122 | |
Number of reflections | 36840 | |
<I/σ(I)> | 12.8 | 0.7 |
Completeness [%] | 99.9 | 99.7 |
Redundancy | 9.13 | 9.34 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.7 | 293 | protein: 5 mg/ml 0.05 M NaCl, 0.05 M Na acetate, pH 5.5 with 1 milli-M ligand. Precipitant: 60% (30% PEG-4K, 0.2 M imidazole malate, pH 6.0) and 40% (24% MPEG-5K, 0.1M sodium acetate, pH 5.5). Cryoprotectant: 40% (25 % diethylene glycol, 12.5 % MPD, 37.5 % 2,3-butanediol, 12.5 % 1,4-dioxane), 12.5% MPEG 5K, 25% MPEG 550, 100 mM (sodium propionate, sodium cacodylate, Bis-Tris-propane(50% component A pH 4; 50% B pH 9.5) and 1 mM ligand. |