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4S1S

Crystal structure of a VRC01-lineage antibody, 45-VRC01.H5.F-185917, in complex with clade A/E HIV-1 gp120 core

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-03-28
DetectorMAR scanner 300 mm plate
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths55.386, 67.662, 266.752
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.496 - 3.390
R-factor0.2636
Rwork0.262
R-free0.29960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3se8
RMSD bond length0.003
RMSD bond angle0.904
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASES
Refinement softwarePHENIX ((phenix.refine: dev_1839))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.460
High resolution limit [Å]3.3903.400
Rmerge0.0680.499
Number of reflections14247
<I/σ(I)>14.41.63
Completeness [%]97.282.8
Redundancy4.72.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529312% PEG 8000, 5% iso-propanol, 0.1M HEPES, 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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