4S0G
Crystal structure of PTPN3 (PTPH1) in complex with Eps15 pTyr849 P850V peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-02 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.90000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.051, 67.332, 68.985 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.076 - 1.723 |
R-factor | 0.1845 |
Rwork | 0.182 |
R-free | 0.22850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rh5 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.309 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASES |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.780 |
High resolution limit [Å] | 1.720 | 1.720 |
Rmerge | 0.068 | 0.522 |
Number of reflections | 28900 | |
<I/σ(I)> | 15 | 2.1 |
Completeness [%] | 99.0 | 99.4 |
Redundancy | 3.8 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1M Tris-HCl, 26% PEG 8000, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |