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4RWY

Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 8ANC131 in complex with HIV-1 clade B YU2 gp120

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]200
Detector technologyCCD
Collection date2012-02-06
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)1.0000
Spacegroup nameP 21 21 21
Unit cell lengths66.250, 67.137, 214.101
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.837 - 2.128
R-factor0.2207
Rwork0.219
R-free0.25350
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.745
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.9_1690))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0002.3902.160
High resolution limit [Å]2.1202.3302.120
Rmerge0.0780.3150.427
Number of reflections43335
<I/σ(I)>17.33.021.74
Completeness [%]72.848.617.3
Redundancy6.24.32.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52986% w/v PEG 3000, 0.1 M HEPES pH 7.5, 0.2M NaCl, 4% v/v 2,2,2 Trifluoroethanol, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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