4RNM
Crystal structure of human polymerase eta inserting dAMPnPP opposite DNA template containing an abasic site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-07-21 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 61 |
Unit cell lengths | 98.679, 98.679, 81.447 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.729 - 2.144 |
R-factor | 0.1697 |
Rwork | 0.167 |
R-free | 0.21900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o3n |
RMSD bond length | 0.008 |
RMSD bond angle | 1.068 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER ((MR)) |
Refinement software | PHENIX ((phenix.refine: dev_1810)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.770 | 2.160 |
High resolution limit [Å] | 2.114 | 2.670 | 2.120 |
Rmerge | 0.113 | 0.267 | 0.903 |
Number of reflections | 25521 | ||
<I/σ(I)> | 15.595 | 6.838 | 1.409 |
Completeness [%] | 98.9 | 99.2 | 99.5 |
Redundancy | 7.6 | 7.6 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 0.1 M MES pH 5.5, 5mM magnesium chloride, 25% PEG 2000 MME , VAPOR DIFFUSION, HANGING DROP, temperature 291.0K |