4RNJ
PaMorA phosphodiesterase domain, apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-09-14 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.934 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.071, 79.895, 138.517 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.741 - 2.320 |
R-factor | 0.1997 |
Rwork | 0.197 |
R-free | 0.25270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3n3t |
RMSD bond length | 0.013 |
RMSD bond angle | 1.431 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 2.400 |
High resolution limit [Å] | 2.320 | 2.320 |
Rmerge | 0.072 | 0.678 |
Number of reflections | 25720 | |
<I/σ(I)> | 13.87 | 1.8 |
Completeness [%] | 99.7 | 98.4 |
Redundancy | 4.28 | 3.69 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 295 | 0.1M Imidazole; MES, 0.09M NaN03; Na2HPO4; (NH4)2SO4, 30% Ethylene glycol; PEG 8000, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K |