4R2U
Crystal Structure of PPARgamma in complex with SR1664
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL11-1 |
| Synchrotron site | SSRL |
| Beamline | BL11-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-07-23 |
| Detector | MARMOSAIC 325 mm CCD |
| Wavelength(s) | 1.033 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 89.630, 63.670, 118.930 |
| Unit cell angles | 90.00, 103.43, 90.00 |
Refinement procedure
| Resolution | 31.474 - 2.300 |
| R-factor | 0.192 |
| Rwork | 0.189 |
| R-free | 0.24800 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2q59 |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.038 |
| Data reduction software | d*TREK (9.9L) |
| Data scaling software | d*TREK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 41.340 | 41.340 | 2.380 |
| High resolution limit [Å] | 2.300 | 4.950 | 2.300 |
| Rmerge | 0.094 | 0.045 | 0.532 |
| Total number of observations | 11047 | 8062 | |
| Number of reflections | 28278 | ||
| <I/σ(I)> | 6.2 | 17.1 | 1.7 |
| Completeness [%] | 97.0 | 98.7 | 79.4 |
| Redundancy | 3.74 | 3.69 | 3.48 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 295 | 1uL protein-ligand complex solution (10mg/mL) was mixed with 1uL well solution (2M ammonium sulfate and 0.1M Tris 8.0), VAPOR DIFFUSION, HANGING DROP, temperature 295K |






