4R2U
Crystal Structure of PPARgamma in complex with SR1664
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-07-23 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.033 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 89.630, 63.670, 118.930 |
Unit cell angles | 90.00, 103.43, 90.00 |
Refinement procedure
Resolution | 31.474 - 2.300 |
R-factor | 0.192 |
Rwork | 0.189 |
R-free | 0.24800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2q59 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.038 |
Data reduction software | d*TREK (9.9L) |
Data scaling software | d*TREK |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.340 | 41.340 | 2.380 |
High resolution limit [Å] | 2.300 | 4.950 | 2.300 |
Rmerge | 0.094 | 0.045 | 0.532 |
Total number of observations | 11047 | 8062 | |
Number of reflections | 28278 | ||
<I/σ(I)> | 6.2 | 17.1 | 1.7 |
Completeness [%] | 97.0 | 98.7 | 79.4 |
Redundancy | 3.74 | 3.69 | 3.48 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 295 | 1uL protein-ligand complex solution (10mg/mL) was mixed with 1uL well solution (2M ammonium sulfate and 0.1M Tris 8.0), VAPOR DIFFUSION, HANGING DROP, temperature 295K |