4Q0D
Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP, methotrexate and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-L-glutamic acid.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X29A |
| Synchrotron site | NSLS |
| Beamline | X29A |
| Temperature [K] | 77 |
| Detector technology | CCD |
| Collection date | 2014-03-07 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1.075 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 213.611, 115.031, 217.643 |
| Unit cell angles | 90.00, 93.92, 90.00 |
Refinement procedure
| Resolution | 48.941 - 3.449 |
| R-factor | 0.2181 |
| Rwork | 0.217 |
| R-free | 0.24200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4ky8 |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.676 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 3.510 |
| High resolution limit [Å] | 3.450 | 9.350 | 3.450 |
| Rmerge | 0.135 | 0.065 | 0.465 |
| Number of reflections | 62866 | ||
| <I/σ(I)> | 6.9 | ||
| Completeness [%] | 91.0 | 99.2 | 85.6 |
| Redundancy | 3.3 | 3.6 | 3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 12% (w/v) PEG 6000, 60 mM ammonium sulfate, 200 mM lithium sulfate, and 100 mM Tris pH 8.0. ChTS-DHFR enzyme (approximately 7 mg/ml) with 1 mM NADPH, 1 mM FdUMP, 1 mM methotrexate and 0.5 mM inhibitor, VAPOR DIFFUSION, HANGING DROP, temperature 298K |






