Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Q0D

Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP, methotrexate and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-L-glutamic acid.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]77
Detector technologyCCD
Collection date2014-03-07
DetectorADSC QUANTUM 315r
Wavelength(s)1.075
Spacegroup nameC 1 2 1
Unit cell lengths213.611, 115.031, 217.643
Unit cell angles90.00, 93.92, 90.00
Refinement procedure
Resolution48.941 - 3.449
R-factor0.2181
Rwork0.217
R-free0.24200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ky8
RMSD bond length0.002
RMSD bond angle0.676
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.510
High resolution limit [Å]3.4509.3503.450
Rmerge0.1350.0650.465
Number of reflections62866
<I/σ(I)>6.9
Completeness [%]91.099.285.6
Redundancy3.33.63
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829812% (w/v) PEG 6000, 60 mM ammonium sulfate, 200 mM lithium sulfate, and 100 mM Tris pH 8.0. ChTS-DHFR enzyme (approximately 7 mg/ml) with 1 mM NADPH, 1 mM FdUMP, 1 mM methotrexate and 0.5 mM inhibitor, VAPOR DIFFUSION, HANGING DROP, temperature 298K

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon