4PU9
E. coli GyrB 43-kDa N-terminal fragment in complex with ADP-BeF3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-11-20 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.97932 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 88.083, 143.245, 79.895 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.080 - 2.400 |
R-factor | 0.2217 |
Rwork | 0.219 |
R-free | 0.27330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ei1 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.961 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHASER (2.5.1) |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 79.920 | 79.920 | 2.490 |
High resolution limit [Å] | 2.400 | 8.980 | 2.400 |
Rmerge | 0.076 | 0.023 | 0.385 |
Rpim | 0.010 | 0.154 | |
Total number of observations | 2743 | 14851 | |
Number of reflections | 20138 | ||
<I/σ(I)> | 16.6 | 44.2 | 4.9 |
Completeness [%] | 99.7 | 99.1 | 99.6 |
Redundancy | 6.9 | 6.3 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 0.2M NaF, 0.1M Bis-Tris propane pH 6.5 and 20%(w/v) PEG3350, vapor diffusion, sitting drop, temperature 293.15K |