4PU3
Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P212121)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X13 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X13 |
Temperature [K] | 200 |
Detector technology | PIXEL |
Collection date | 2013-03-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.820, 122.450, 189.850 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.381 - 3.390 |
R-factor | 0.259 |
Rwork | 0.256 |
R-free | 0.31540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3dnv |
RMSD bond length | 0.003 |
RMSD bond angle | 0.800 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | AMoRE |
Refinement software | PHENIX ((phenix.refine: dev_1287)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.390 | |
High resolution limit [Å] | 3.390 | 3.390 |
Number of reflections | 19211 | |
Completeness [%] | 98.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 293 | 0.2 M calcium acetate hydrate, pH 7.5, 20% PEG3350, VAPOR DIFFUSION, temperature 293K |
1 | VAPOR DIFFUSION | 7.5 | 293 | 0.2 M calcium acetate hydrate, pH 7.5, 20% PEG3350, VAPOR DIFFUSION, temperature 293K |