4PMP
The structure of TrkA kinase bound to the inhibitor 1-cyclopropyl-1-[3-(1,3-thiazol-2-yl)benzyl]-3-[4-(trifluoromethoxy)phenyl]urea
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-04-09 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.0 |
Spacegroup name | P 64 |
Unit cell lengths | 75.543, 75.543, 112.508 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 23.860 - 1.800 |
R-factor | 0.1662 |
Rwork | 0.165 |
R-free | 0.18510 |
RMSD bond length | 0.010 |
RMSD bond angle | 0.970 |
Data reduction software | XDS |
Refinement software | BUSTER (2.11.5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 65.420 | 65.420 | 1.970 |
High resolution limit [Å] | 1.800 | 4.410 | 1.800 |
Rmerge | 0.062 | 0.036 | 0.293 |
Rpim | 0.029 | 0.016 | 0.161 |
Total number of observations | 174135 | 12900 | 28231 |
Number of reflections | 32854 | ||
<I/σ(I)> | 18.5 | 42.8 | 4.4 |
Completeness [%] | 97.7 | 98.2 | 91.6 |
Redundancy | 5.3 | 5.6 | 3.9 |
CC(1/2) | 0.999 | 0.998 | 0.924 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 0.1M Bis-Tris, 2.3M AmmoniumAcetate |