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4PMF

Human transthyretin (TTR) complexed with curcumin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-04-17
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9793
Spacegroup nameP 21 21 2
Unit cell lengths43.255, 85.487, 64.168
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.000 - 1.350
R-factor0.1777
Rwork0.176
R-free0.20880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4pm1
RMSD bond length0.007
RMSD bond angle1.258
Data scaling softwareXDS
Refinement softwarePHENIX ((phenix.refine: 1.8.4_1496))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.0001.400
High resolution limit [Å]1.3501.350
Rmerge0.065
Number of reflections52995
<I/σ(I)>18.071.94
Completeness [%]99.999.9
Redundancy8.959.03
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5293Precipitant: 40% MPEG 2,000, 1% dioxane, 0.1 M sodium cacodylate, pH 7.5. Cryoprotectant: 40% mixed (25% dioxane, 25% DMSO, 12.5% ethylene glycol, 12.5% 1,2-propanediol, 12.5% glycerol, 12.5% 2,3-butanediol) 50% (25% MPEG 5K, 0.1 M mixed (sodium acetate, ADA, bicine 20% pH 4 and 80% pH 9), 3 milli-M Curcumin for 20 min

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