4N47
Structure of Thermus thermophilus Argonaute bound to guide DNA and 12-mer target DNA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-11-15 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.97 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 58.886, 110.548, 124.039 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 38.329 - 2.823 |
| R-factor | 0.1957 |
| Rwork | 0.192 |
| R-free | 0.26390 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3f73 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.010 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.850 |
| High resolution limit [Å] | 2.800 | 7.590 | 2.800 |
| Rmerge | 0.096 | 0.052 | 0.612 |
| Number of reflections | 19791 | ||
| <I/σ(I)> | 12.9 | ||
| Completeness [%] | 99.2 | 91.2 | 99.8 |
| Redundancy | 5.9 | 5.7 | 6.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 306 | 0.2 M magnesium chloride, 0.1 M Tris-HCl, pH 8.5, 25% PEG3350, VAPOR DIFFUSION, HANGING DROP, temperature 306K |






