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4N35

Structure of langerin CRD I313 complexed with GlcNAc-beta1-3Gal-beta1-4Glc-beta-CH2CH2N3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyPIXEL
Collection date2012-01-19
DetectorPSI PILATUS 6M
Wavelength(s)0.97945
Spacegroup nameP 42
Unit cell lengths79.490, 79.490, 91.930
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.580 - 1.850
R-factor0.1679
Rwork0.166
R-free0.21180
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)3p5g
RMSD bond length0.007
RMSD bond angle1.103
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHENIX
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]36.48036.4811.950
High resolution limit [Å]1.8505.8501.850
Rmerge0.0240.166
Total number of observations1086248066
Number of reflections48723
<I/σ(I)>30.822.54.6
Completeness [%]99.899.499.4
Redundancy6.76.86.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7295Protein solution: 2.3-4.0 mg/mL langerin, 2.5 mM CaCl2, 10-100 mM Tris (pH 8.0), 25 mM NaCl and 15mM TR54. The reservoir solution contained 0.1 M HEPES (pH 7.0), 0.1-0.2 M MgCl2, and 20-35% polyethylene glycol 3350, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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