4N10
Crystal structure of plasmodium falciparum oxidized glutaredoxin 1 (PfGrx1) complexed with cisplatin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-07-02 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 48.652, 48.652, 83.234 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 23.349 - 1.870 |
R-factor | 0.1817 |
Rwork | 0.180 |
R-free | 0.22270 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.129 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AutoSol |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.900 |
High resolution limit [Å] | 1.870 | 5.070 | 1.870 |
Rmerge | 0.045 | 0.033 | 0.423 |
Number of reflections | 9906 | ||
<I/σ(I)> | 18.5 | ||
Completeness [%] | 99.9 | 98.6 | 100 |
Redundancy | 16 | 14.1 | 15.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 12.5%(W/V) PEG1000, 12.5%(W/V) PEG3350, 12.5%(V/V) MPD, 0.02M AMINO ACIDS, 0.1M MOPS/HEPES SODIUM,, pH 7.5, vapor diffusion, hanging drop, temperature 293K |