4MCD
hinTrmD in complex with 5-PHENYLTHIENO[2,3-D]PYRIMIDIN-4(3H)-ONE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 140 |
Detector technology | CCD |
Collection date | 2012-02-10 |
Wavelength(s) | 0.97 |
Spacegroup name | H 3 2 |
Unit cell lengths | 93.345, 93.345, 178.908 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.120 - 1.550 |
R-factor | 0.2068 |
Rwork | 0.205 |
R-free | 0.23490 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.251 |
Data reduction software | d*TREK |
Data scaling software | SCALA (3.2.5) |
Phasing software | AMoRE |
Refinement software | REFMAC (5.5.0046) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.124 | 30.124 | 1.630 |
High resolution limit [Å] | 1.287 | 4.900 | 1.550 |
Rmerge | 0.186 | 0.032 | 0.032 |
Total number of observations | 14267 | 48650 | |
Number of reflections | 43053 | ||
<I/σ(I)> | 6.3 | 15 | 0.2 |
Completeness [%] | 98.6 | 97.5 | 95.1 |
Redundancy | 10.2 | 9.9 | 8.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | Protein at 10 mg/mL in the buffer: 20mM Tris pH 8.0, 150 mM NaCl, 10% Glycerol, 1mM DTT, 1mM EDTA. mixed 1:1 with well solution containing: 200 mM CaAcetate, 24% PEG 400, 100 mM Sodium Acetate, VAPOR DIFFUSION, SITTING DROP, temperature 293K |