4M76
Integrin I domain of complement receptor 3 in complex with C3d
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 144.460, 65.120, 62.540 |
Unit cell angles | 90.00, 115.69, 90.00 |
Refinement procedure
Resolution | 45.107 - 2.804 |
R-factor | 0.1979 |
Rwork | 0.194 |
R-free | 0.24190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdb entries 1IDO 1c3d |
RMSD bond length | 0.002 |
RMSD bond angle | 0.657 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 98.895 | 3.000 | |
High resolution limit [Å] | 2.800 | 50.000 | 2.800 |
Rmerge | 0.049 | 0.291 | |
Number of reflections | 12888 | ||
<I/σ(I)> | 16.77 | 4.47 | |
Completeness [%] | 98.1 | 94.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | PEG 3350, pH 7, vapor diffusion, hanging drop, temperature 298K |