4M64
3D crystal structure of Na+/melibiose symporter of Salmonella typhimurium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-11-19 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.004 |
Spacegroup name | P 32 |
Unit cell lengths | 127.206, 127.206, 206.303 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.640 - 3.350 |
R-factor | 0.31422 |
Rwork | 0.312 |
R-free | 0.35945 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Threading Model of MelBst on FucP |
RMSD bond length | 0.012 |
RMSD bond angle | 1.771 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 3.470 |
High resolution limit [Å] | 3.350 | 3.350 |
Rmerge | 0.092 | 0.770 |
Number of reflections | 52990 | |
<I/σ(I)> | 6 | 1.52 |
Completeness [%] | 99.4 | 99.4 |
Redundancy | 2.8 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 0.1M MES, 0.1M NaCl, 0.05M CaCl2, 32% PEG 400, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |