4LUD
Crystal Structure of HCK in complex with the fluorescent compound SKF86002
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B2 |
Synchrotron site | SPring-8 |
Beamline | BL26B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-02-01 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.300, 73.400, 180.290 |
Unit cell angles | 90.00, 96.77, 90.00 |
Refinement procedure
Resolution | 47.758 - 2.850 |
R-factor | 0.2149 |
Rwork | 0.212 |
R-free | 0.26070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2c0t |
RMSD bond length | 0.002 |
RMSD bond angle | 0.622 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER (2.5.2) |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 179.033 | 47.758 | 3.000 |
High resolution limit [Å] | 2.850 | 9.010 | 2.850 |
Rmerge | 0.031 | 0.409 | |
Rmeas | 0.036 | 0.476 | |
Rpim | 0.019 | 0.242 | |
Total number of observations | 3511 | 16365 | |
Number of reflections | 29538 | ||
<I/σ(I)> | 10.4 | 19.1 | 3.4 |
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 3.8 | 3.6 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 288 | 0.1M Tris, 0.1M Calcium Acetate, 20% Glycerol, 24% PEG 6000, 2mM SKF86002, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 288K |