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4LIF

Crystal structure of the JCV large T-antigen origin binding domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2013-03-14
DetectorADSC QUANTUM 315r
Wavelength(s)1.075
Spacegroup nameI 41
Unit cell lengths103.793, 103.793, 34.860
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.696 - 2.600
R-factor0.1782
Rwork0.176
R-free0.22290
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fuf
RMSD bond length0.007
RMSD bond angle0.990
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.8.2_1309))
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]2.600
Rmerge0.068
Number of reflections5906
<I/σ(I)>37.6
Completeness [%]99.8
Redundancy14.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52730.1 M Tris, 0.2 M LiSO4, 30 % Peg 4000, VAPOR DIFFUSION, SITTING DROP, temperature 273K, pH 8.5

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