4LDT
The structure of h/ceOTUB1-ubiquitin aldehyde-UBCH5B~Ub
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 23-ID-D |
| Synchrotron site | APS |
| Beamline | 23-ID-D |
| Temperature [K] | 77 |
| Detector technology | CCD |
| Collection date | 2012-03-11 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 104.894, 131.612, 46.501 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 33.650 - 1.901 |
| R-factor | 0.19342 |
| Rwork | 0.192 |
| R-free | 0.22318 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4dhz |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.248 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | REFMAC (5.7.0029) |
| Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 33.650 | 1.930 |
| High resolution limit [Å] | 1.901 | 1.901 |
| Number of reflections | 51582 | |
| <I/σ(I)> | 8.5 | 1.7 |
| Completeness [%] | 99.0 | 95.4 |
| Redundancy | 8 | 3.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293.15 | 1:1 mix of 12 mg/mL purified complex and well solution (100 mM Bis-Tris, pH 6.0, 200 mM magnesium chloride, 22% PEG3350), crystals appeared in about 2 to 3 days, cryoprotection with well solution + 10% ethylene glycol, flash frozen in liquid nitrogen, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K |






