4L7I
Crystal structure of S-Adenosylmethionine synthase from Sulfolobus solfataricus complexed with SAM and PPi
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-03-08 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 151.597, 151.597, 226.125 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.622 - 2.189 |
R-factor | 0.1651 |
Rwork | 0.164 |
R-free | 0.18880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hpv |
RMSD bond length | 0.007 |
RMSD bond angle | 1.022 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX (1.8.2_1309) |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.230 |
High resolution limit [Å] | 2.190 | 5.940 | 2.190 |
Rmerge | 0.142 | 0.064 | |
Number of reflections | 79075 | ||
<I/σ(I)> | 6.7 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 19.5 | 20.1 | 14.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 298 | Protein Solution (6.8-13.5 mg/ml protein in 25mM Tris pH 8.0, 5mM SAM) mixed in a 1:1 ratio with the well solution (1.4M Sodium phosphate monobasic monohydrate / Potassium phosphate dibasic, pH 5.6). Cryoprotected with 25% Ethylene Glycol, VAPOR DIFFUSION, SITTING DROP, temperature 298K |