Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4L7E

Three dimensional structure of mutant D78A of human HD domain-containing protein 2, Genomics Consortium (NESG) Target HR6723

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X4A
Synchrotron siteNSLS
BeamlineX4A
Temperature [K]100
Detector technologyCCD
Collection date2012-11-19
DetectorADSC QUANTUM 4
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths65.762, 68.886, 106.154
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.567 - 2.229
R-factor0.1758
Rwork0.174
R-free0.21510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4dmb
RMSD bond length0.007
RMSD bond angle1.077
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareBALBES
Refinement softwarePHENIX (dev_1269)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]2.200
Rmerge0.092
Number of reflections24213
Completeness [%]99.9
Redundancy7.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1microbatch under oil5277Protein solution: 100mM NaCl, 5mM DTT, 0.02% NaN3, 10mM Tris-HCl (pH 7.5) . Reservoir solution:0.1M LiCl, 0.1M sodium acetate, 40% PEG1000, microbatch under oil, temperature 277K

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon