Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KXM

Crystal structure of DNPH1 (RCL) WITH N6-ISOPENTENYL-AMP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM30A
Synchrotron siteESRF
BeamlineBM30A
Detector technologyCCD
Collection date2010-11-18
DetectorADSC QUANTUM 315r
Wavelength(s)0.979756
Spacegroup nameP 1 21 1
Unit cell lengths32.146, 96.568, 79.034
Unit cell angles90.00, 101.58, 90.00
Refinement procedure
Resolution38.710 - 2.240
R-factor0.1765
Rwork0.174
R-free0.22720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4fyi
RMSD bond length0.008
RMSD bond angle1.146
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.5.0102)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.9702.390
High resolution limit [Å]2.2402.240
Rmerge0.0500.107
Number of reflections21068
<I/σ(I)>11.16.7
Completeness [%]92.065.4
Redundancy3.42.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529118% PEG8K, 100 MM NaCaCo, 200 MM ZINC ACETATE, PH 6.5, vapor diffusion, hanging drop, temperature 291K

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon