Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4JKC

Open and closed forms of T1800E human PRP8 RNase H-like domain with bound Mg ion

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2011-04-14
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97949
Spacegroup nameP 21 21 21
Unit cell lengths76.195, 77.932, 93.680
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.290 - 1.500
R-factor0.1299
Rwork0.128
R-free0.16360
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3enb
RMSD bond length0.010
RMSD bond angle1.356
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareREFMAC (5.6.0117)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.550
High resolution limit [Å]1.5003.2301.500
Rmerge0.0410.0290.370
Number of reflections84356
<I/σ(I)>22.8
Completeness [%]94.293.667.1
Redundancy4.54.82.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.529815% PEG 4000, 300mM MgCl2, 100mM Tris, pH 7.5, vapor diffusion, temperature 298K

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon